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Carpentries Incubator Pre-Alpha This lesson is in the pre-alpha phase, which means that it is in early development, but has not yet been taught.

    Carpentries Incubator
    Imageomics Snakemake Workshop
    • Imageomics Snakemake Workshop
    • Key Points
    • Glossary
    • Learner Profiles
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      Imageomics Snakemake Workshop
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    • Instructor View

      Summary and Setup
      1. Introduction
      2. Project Setup
      3. Environment Setup
      4. Create a Workflow
      5. Add an R Script
      6. Process multiple files
      7. Use a container
      8. Reuse another workflow
      9. Add Summary Analysis
      10. Run at Scale

      • Key Points
      • Glossary
      • Learner Profiles

      See all in one page

      Introduction


      Project Setup


      Environment Setup


      Create a Workflow


      Add an R Script


      Process multiple files


      Use a container


      Reuse another workflow


      Add Summary Analysis


      Run at Scale



      This lesson is subject to the Code of Conduct

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      Materials licensed under CC-BY 4.0 by the authors

      Template licensed under CC-BY 4.0 by The Carpentries

      Built with sandpaper (0.16.11), pegboard (0.7.7), and varnish (1.0.5)


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